Global Ecology and Conservation
○ Elsevier BV
Preprints posted in the last 30 days, ranked by how well they match Global Ecology and Conservation's content profile, based on 25 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.
Nogueira, C.; Alves, B. S. G.; Anile, S.; Barona, J.; Bastianelli, M. L.; Burgos, T.; Catello, M.; Curveira-Santos, G.; Diaz-Ruiz, F.; Federico, P.; Fiderer, C.; Flezar, U.; Gerngross, P.; Gil-Sanchez, J. M.; Henrich, M.; Hernandez-Hernandez, J.; Heurich, M.; Krofel, M.; Maronde, L.; Matias, G.; Moeller, A. K.; Molinari-Jobin, A.; Peters, A.; Port, M.; Premier, J.; Rocha, F.; Sanchez-Cerda, M.; Sayol, F.; Vilella, M.; Virgos, E.; Zimmermann, F.; Ferreras, P.; Jimenez, J.; Monterroso, P.
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Effective conservation depends on demographic metrics that reliably reflect species status, particularly population abundance. For elusive species occurring at low densities, however, such metrics remain difficult to obtain. Spatial capture-recapture (SCR) models are the standardized approach for estimating density in marked populations, but their data requirements, especially the need for multiple spatial recaptures across individuals, often limit applicability in small or data-poor populations. This constraint has resulted in knowledge gaps for some of the most vulnerable species, undermining evidence-based conservation planning and management. Using camera-trap data and SCR-derived density estimates from data-rich populations, we evaluated alternative, less data-demanding metrics and tested the hypothesis: Space to Event (STE), Mean Local Abundance (MLA), and Relative Abundance Index (RAI) exhibit predictable relationships with SCR-derived density; if supported, these metrics can reliably estimate density in populations where SCR models cannot be implemented. We applied this framework to the European wildcat (Felis silvestris), an elusive small felid with highly fragmented populations across Europe, for which density estimates are largely lacking despite growing conservation concern. Across 21 study areas spanning most of the species' range, our results indicate that European wildcats generally occur at lower densities than previously reported. SCR-derived estimates (n=10) averaged 10.32 {+/-} 11.56 inds/100km2, while STE enabled density estimation in five additional data-poor areas (mean 5.52 {+/-} 5.33 inds/100km2). STE showed a strong linear relationship with SCR-derived density (R2=0.98), supporting its use as a viable alternative when SCR is infeasible, although it tended to underestimate compared to SCR, especially at higher densities. In contrast, MLA and RAI showed weaker and non-linear relationships with SCR-derived density (R2=0.65), indicating substantially lower explanatory power and suggesting their estimates are more strongly influenced by confounding processes. By explicitly calibrating alternative metrics across a wide density gradient throughout most of the species' distribution, this study provides a transferable methodological framework for estimating density in low-density wildlife populations and the first continent-wide, standardized density assessment of a carnivore species. From a management perspective, our findings identify populations that may be most vulnerable, particularly those with the lowest densities, and highlight the need to prioritize absolute abundance monitoring.
Shrestha, U. B.; Joshi, S.
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Nepal's rangelands provide multiple benefits, including support for pastoral livelihoods and alpine biodiversity, regulation of water and soil nutrients, and sequestering carbon. Climate change and anthropogenic pressures are altering these rangelands, leading to vegetation and biodiversity change. However, national-scale assessments of rangeland change are limited in Nepal. This study quantified rangeland changes at multiple spatial scales and assessed the climatic and non-climatic drivers of rangeland change. About 80.7% of Nepal's high-altitude rangeland (> 2,000m) outside protected areas showed no significant change. Among areas exhibiting significant annual maximum NDVI trends, 383,281 ha (18.6%) showed positive and 14,702 ha (0.7%) showed negative trends, corresponding the ratio of increase in vegetation greenness and decline in vegetation greenness to 26:1. Climate predicted positive trends covered 627,184 ha (30.5%), whereas residual trends caused by non-climatic drivers covered 94,656 ha (4.6%). Climate induced negative trends covered 47,609 ha (2.3%) while residual trends were observed in 6,260 ha (0.3%). Negative trend pixels were concentrated mainly within the 3,000 to 5,000 m elevation band, with Karnali Province recording the highest proportional climate predicted decline in vegetation greenness (3.4%). At the municipality scale, rangeland change showed no significant relationship with grazing pressure derived from gridded livestock data, suggesting that grazing pressure alone did not explain the non-climatic vegetation signal. These spatially explicit, nationally consistent results identify where rangeland change is occurring and help distinguish climatic and non-climatic drivers of rangeland vegetation change, providing evidence to support targeted rangeland management under Nepal's federal governance structure.
Rana, D.; Ramakrishnan, U.
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Connectivity is critical to sustaining endangered carnivores in speciose yet fragmented landscapes such as in the global south. Corridors to mitigate fragmentation are designed based on charismatic species or habitat-based approaches, but their multispecies effectiveness for maintaining functional connectivity remains poorly tested. We combined landscape genetic analyses across five sympatric carnivores - Panthera tigris, Panthera pardus, Prionailurus viverrinus, Felis chaus, and Melursus ursinus, to evaluate how landscape features shape functional connectivity in a globally important felid landscape. We then assessed the efficiency of existing tiger corridors and single-species surrogates for maintaining multispecies functional connectivity. Species exhibited contrasting responses to landscape variables, producing distinct resistance surfaces and connectivity corridors. Spatial similarity of connectivity between species pairs was highly variable (r = 0.14-0.93), but no single species effectively captured connectivity patterns of the broader carnivore community (maximum mean overlap of <0.7 across species). Moreover, genetically optimized corridors were at least 70% more efficient in capturing connectivity compared to existing tiger corridors, demonstrating mismatches between structural and functional connectivity. Our results highlight limitations of surrogate-based corridor planning and demonstrate that integrating multispecies functional connectivity can substantially improve conservation planning in human-dominated landscapes.
Cascini, M.; Simpson, L.; Worboys, S.; Worboys, W.; Guja, L.; Knapp, Z.; Bredell, P.; Percival, J.; Rossetto, M.; Crayn, D.
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A core aim of ex situ conservation is to represent wild genetic diversity in managed living collections. For the climate-threatened tropical montane cloud forest (TMCF) flora of northeast Australia, an ex situ metacollection of plants and seeds has been established by the Tropical Mountain Plant Science (TroMPS) project. In this study we used reduced-representation sequencing (DArTseq) of wild, herbarium, and ex situ material alongside provenance information for ten species, to pursue two central aims: to characterise landscape-scale genetic structure across species' ranges, and to evaluate how well the assembled metacollections represent that wild diversity. Analyses revealed consistent patterns of genetic differentiation among mountain top populations across multiple species, reflecting the isolating influence of lowland gaps between upland habitats, with the degree of differentiation varying among species. These results provide the first genetic baseline for Australian TMCF flora and reinforce the importance of treating individual mountain top populations as distinct units for conservation management. Additionally, the project provided valuable insights into the logistical challenges of coordinated multi-institutional collecting, informing strategies for metacollection design more broadly. Evaluation of the metacollection revealed both strengths and gaps in representation across species, providing an evidence base to refine the current holdings and guide future targeted collecting to strengthen their long-term conservation value.
Vallery, A. C.; Kabra, K.; Gibbons, R.; Arnold, H.; Minnich, N.; Barman, A.
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Waterbirds serve as important indicators of both aquatic and terrestrial ecosystem health, making effective monitoring essential for tracking population health and identifying potential causes of decline. Drones have provided opportunities to overcome historic waterbird monitoring challenges, but the expertise and time required for manual image analysis creates a major bottleneck. Recent advances in deep learning-based object detection have enabled rapid, automatic detection of features in complex ecological imagery, though applications have largely been limited to single-species colonies, and practitioners lack quantitative comparisons of annotation time and accuracy across different levels of automation. We systematically compared four waterbird monitoring approaches using identical survey areas from Chester Island, a mixed-species colony in Matagorda Bay, Texas, in 2025: (1) traditional ground-based counts, (2) manual drone imagery-based counts, (3) computer-assisted counts using pre-annotations from an object detector with manual human verification (Human+ML), and (4) fully automated counts using object detector annotations (ML-only). We trained a YOLOv10 object detection model on manually annotated imagery of Chester Island in 2021 and applied it to the 2025 imagery. Manual drone annotation detected 6,530 birds in 40.5 hr and served as the primary reference standard. Human+ML detected 5,826 birds (89% of manual) in 7.7 hr, an 81% reduction in annotation time. ML-only detected 5,679 birds (87% of manual) in approximately 46 min, a 98% reduction. Ground counts recorded 5,868 birds (90% of manual). Detection generalized well across species while classification depended heavily on training data and morphological distinctiveness. The Human+ML workflow emerged as a practical middle ground, providing practitioners with empirical data to evaluate partial versus full automation strategies based on monitoring objectives.
Miccolis, E.; Rasotto, M. B.; De Pascale, F.; Pievani, T.
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Italy, one of Europe's most biodiverse countries, is expected to undergo landscape-wide nature recovery thanks to the EU Nature Restoration Regulation. National red lists represent critical instruments for informing conservation strategies at finer geographic resolutions and prioritizing taxa of national importance; yet the taxonomic completeness of Italian red lists remains unquantified in relation to national biodiversity. Equally, no systematic evaluation has been conducted on the representation of threatened and endemic Italian taxa within European and international conservation directives and treaties. We present the first comprehensive review of threat status and policy inclusion of Italian biodiversity, encompassing animals, plants, fungi, lichens, and algae. We cross-referenced national species checklists with Italian, European, Mediterranean, and global IUCN red lists, alongside policy annexes from the Birds and Habitats Directives, the Bern and Barcelona Conventions, and CITES. Our dataset comprised 76,845 taxa, of which 8,389 are endemic; yet red list assessments exist for only 10% of this total (7,349 taxa, including 1,700 endemics). Conservation policy coverage is even more restrictive: only 1,346 taxa are listed under at least one legislative instrument, with only half of these classified as threatened. This constitutes a compounding double bottleneck with most of the Italian biodiversity remaining both unassessed and unprotected and systematically biasing conservation policy toward an unrepresentative fraction of national biodiversity. We recommend accelerated national assessments and urgent establishment of a national biodiversity priority list founded on transparent prioritization protocols. This would complement ecosystem-based interventions mandated by the Nature Restoration Regulation while correcting for vertebrate-centred biases.
Gibbons, A.; Parnell, A.; Donohue, I.; Ogasawara, M.; Ross, S. R. P.-J.
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O_LIMonitoring and limiting the spread of invasive species on islands requires efficient detection and population estimation methods. However, elusive species can be difficult to monitor using traditional methods, making autonomous approaches such as camera trapping and acoustic monitoring increasingly valuable. C_LIO_LIOn the island of Okinawa, Japan, the small Indian mongoose ( Urva auropunctata) threatens many native species since its introduction in 1910. Listed among the worlds worst invasive species, effective monitoring of U. auropunctata in Okinawa is critical. The Okinawa Environmental Observation Network (OKEON) uses camera traps to detect U. auropunctata, but success depends on precise placement. Though OKEON also includes a high-resolution acoustic monitoring programme, no audio classification model currently exists for U. auropunctata. Developing such a model could improve substantially our capacity to detect and manage the species. C_LIO_LIUsing sparse U. auropunctata vocalisations collected from camera trap videos, we built a lightweight Convolutional Neural Network distilled from a more complex model for classifying contact calls and alarm calls of U. auropunctata. Our distilled model performed similarly to the full model at detecting vocalisations from training data, but was considerably faster. C_LIO_LIWe applied the distilled classifier to [~]486 hrs of audio collected over eight years from southern Okinawa, where we successfully detected U. auropunctata a handful of times in each year of recording. In spite of strong model performance on test data, our model did not transfer well to unseen data, perhaps owing to the rarity of U. auropunctata calls and consequent small training dataset size, limiting its utility for ecological monitoring. C_LIO_LIPractical implication. The use of sparse audio data from camera trap videos to train an acoustic classifier had limited utility to detect the rarely vocalising U. auropunctata from passive acoustic monitoring data. We provide several recommendations for enhancing classifier performance to provide robust actionable insights into the distribution and spread of U. auropunctata, and aid targeted conservation efforts for Okinawas threatened biodiversity. C_LI
Nikolaeva, A. S.; Santangelo, J.; Smith, L.; Dodd, R.; Nielsen, R.
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The coast redwood (Sequoia sempervirens) is a long-lived, hexaploid conifer of high ecological, cultural, and economic value whose range has been greatly reduced by historical logging. Effective restoration and conservation depend on understanding patterns of genetic differentiation across the redwood range to delineate populations for management prioritization. Yet, past range-wide studies provided only a partial picture of population structure in coast redwood as they relied on a limited set of genetic markers or limited sampling, as sequencing was done on the same range-wide provenance collection. Here, we analyze 334,029 SNPs from a new range-wide set of 224 individuals using a dosage-based approach that accounts for polyploidy. Principal coordinates and neighbor-joining analyses reveal clear latitudinal genetic differentiation, with a distinct break south of San Francisco Bay. Outlier SNP analysis indicates new candidate loci involved in salinity tolerance, climate stress response, and nutrient uptake, suggesting potential local adaptation. These results point to the central role of geography in shaping genetic variation in coast redwood and give scientific basis for designing new conservation strategies and future experiments, including assisted migration, provenance trials, and restoration planning aimed at preserving the species into the future.
Shanmugam, M.; Pulla, S.; Epinal, L. N.
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Tropical dry evergreen forests (TDEFs) are a unique and highly threatened forest type of the dry tropics. Their restoration could be strengthened if native species demonstrate carbon sequestration comparable to widely used non-native trees. We assessed biodiversity and carbon sequestration in a restored TDEF in India, developed over 50 years from a largely barren landscape. The site now supports high woody-plant diversity, with 91 native species across 34 families. Aboveground biomass (AGB) averaged 66.91 +/- 41.2 Mg/ha comparable to seasonally dry tropical forests globally. Although native species were planted more recently and are shorter than non-natives, they contributed 23.86 +/- 23.4 Mg/ha to AGB and show potential for future increases in basal area. Given their comparable wood densities and capacity to attain similar heights, native species are predicted to sequester carbon at levels similar to non-natives in the long term. AGB was unrelated to species diversity. Overall, native TDEF species can achieve carbon storage while maintaining ecological integrity.
Tamechika, M. M.; Shahdadi, A.; Chan, B. K. K.
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Fistulobalanus albicostatus Pilsbry, 1916 (Thoracica: Balanidae) is a tropical to temperate species distributed in the NW Pacific. The previously known northernmost record of this species in Japan was from Aomori Prefecture, at the northern end of Honshu Island, Japan. However, field surveys conducted in 2023 and 2026 confirmed the occurrence of F. albicostatus in Hakodate Bay, the southern end of Hokkaido, Japan, across the Tsugaru Strait, thereby extending the northern limit of its known distribution. A line transect survey conducted in May 2026 recorded seven living individuals within an area of 128 m. F. albicostatus was rare on the mid-high shores, accounting for only 2% of all barnacle individuals in a quadrat survey. The basal diameter of the living individuals ranged from 0.76 to 1.23 cm, and all individuals possessed ovaries. Based on characteristics of both morphological and COI gene, the specimens were identified as F. albicostatus, and belonged to the same haplotype of populations that are present in Honshu Island. The establishment of F. albicostatus in Hokkaido suggests an ongoing northward range shift of this warm-water species, with the potential for further expansion under continued ocean warming.
Lopes Dias, L.; Ribas, L. G. d. S.; Ribeiro, B. R.; Geldmann, J.; Prado, F.; Soares, N.; De Marco, P.
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Native vegetation protection is a key strategy for delivering both biodiversity and climate benefits, and protected areas have been widely adopted to keep tropical biomes standing. Yet deforestation is driven by interrelated environmental and social factors, and the effectiveness of protected areas varies considerably across space. Here, we evaluated the impact of 802 protected and conserved areas in the Brazilian Amazon on preventing vegetation loss and avoiding carbon emissions over the past 40 years using statistical matching to address the location bias of protection. We found that protected areas were effective throughout the study period, reducing the probability of deforestation per km2 by an average of 0.5 percentage points per year. While the Amazon biome lost 14% of its native vegetation between 1986 and 2024, protected areas prevented the deforestation of 290,436 km2, nine times their actual internal loss. They also stored 45,336 Mt of carbon in 2016 (61% of the Amazon stock) and prevented the emission of 7,300 Mt of CO2 by 2024. Deforestation inside the areas and remoteness reduced their impact, while areas that were initially more preserved were more effective. Area size and age had no influence over impact once we analyzed the amount of avoided deforestation per size and age. Impact also varied across Brazilian states, highlighting the role of regional context. All three protection categories (conservation units, indigenous lands, and quilombola territories) showed a positive mean impact, indicating that each, in aggregate, contributes to reducing deforestation. These findings provide robust evidence of the substantial role of Amazonian protected areas in habitat conservation and climate mitigation, while underscoring that this contribution remains undervalued. We advocate for strategically expanding protection to areas of greatest potential impact, and for securing adequate funding to ensure protected areas can fulfill that potential.
Ennes Silva, F.; Mourthe, I.; Plaza Pinto, M.; Rabelo, R. M.; dos Santos Junior, M. A.; Borges, L. H. M.; Diogenes, L. C. R.; Marsh, L. K.; Alvares Oliveira, M.; Ribas, C. C.; Boubli, J. P.
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Aims: Species' distributions are determined by the interplay between ecological niche and dispersal ability, constrained by biogeographical barriers. Bald-headed uakaris (Cacajao spp.) are highly specialized primates often associated with seasonally flooded forests. In this study, we used ecological niche models to assess changes in habitat suitability and geographic distribution of uakari species under future scenarios. Location: Western Amazonia. Methods: We integrated ecological niche models, current deforestation data, and dispersal ability to estimate habitat suitability under two Shared Socioeconomic Pathway (SSP) scenarios: intermediate (SSP2-4.5) and very high (SSP5-8.5) greenhouse gas (GHG) emissions. Results: Our models project shifts in suitable conditions for all species. Three of the five species are projected to experience substantial reductions ([≥]62%) in suitable habitat conditions within their current ranges by 2050 under both future scenarios. Across the western Amazonia, up to 219,189 km2 and 211,276 km2 of land are projected to be unsuitable within the uakari ranges under the intermediate and very high emissions scenarios, respectively. This is particularly relevant for C. calvus, C. rubicundus, and C. ucayalii. At the species level, the uakaris may lose between 343 km2 and 84,531 km2 of their ranges in the intermediate scenario and 858 km2 and 76,216 km2 in the very high scenario. Shifts in suitability due to climate change are expected to vary from 6 to 191 km in the intermediate scenario and from 5 to 168 km in the very high scenario. Furthermore, the uakaris may lose between 0.5% and 8% of their current ranges due to deforestation in all scenarios. Main conclusions: Our findings reveal a high sensitivity of the uakaris to climate change impacts. It is projected that all species may experience contractions in the suitable areas and spatial suitability within their ranges by 2050, underscoring climate change as a relevant threat to these taxa.
Costa, J. H. A. d.; Guedes, G. H. S.
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The biodiversity crisis is exacerbated by persistent gaps in taxonomic, geographic, and conservation knowledge. This study provides a comprehensive assessment of Linnean, Wallacean, and conservation shortfalls in Rivulidae (Cyprinodontiformes), one of the most diverse families of Neotropical freshwater fishes. To this end, an extensive dataset was compiled, comprising 494 valid species, 51 synonyms, 3,419 occurrence records, and information on life cycle, distribution, and conservation status. The Linnean shortfall remains open: after 1975, the rate of species description increased sharply, and estimates indicate that 103 species remain undescribed (95% CI: 53-212). The year of species description was influenced by detectability and accessibility factors, with larger species, more widely distributed species, and species occurring in more densely populated areas being described earlier. The Wallacean shortfall was broad and spatially uneven: only 5.34% of the region was considered adequately sampled. The conservation shortfall was also substantial: 179 species are threatened with extinction, 69 species remain Not Evaluated, and 62 are Data Deficient. The mean time between taxonomic description and first IUCN extinction-risk assessment was 25.7 years. Moreover, 59.9% of species have no records within protected areas, including 69.3% of threatened species. These findings synthesize an urgent challenge: biodiversity knowledge and conservation shortfalls must be overcome simultaneously to protect species that are still being discovered, remain poorly documented spatially, and are restricted to habitats under intense anthropogenic pressure. The conservation of Rivulidae cannot wait for complete knowledge; action amid uncertainty is necessary to prevent both known and unknown species from disappearing.
Bonet Bigata, A.; Sutherland, C.; Lambin, X.
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O_LIWhen eradication is unfeasible, invasive predator control should evaluate how removal affects ecological responses by native species. Assessments often use total invasive predator abundance to evaluate prey responses, yet intraspecific variation in diet and space use means that some subgroups cause disproportionate impacts. Identifying these problem individuals, and the spatial scales over which their impacts operate, can enable targeted spatially explicit removal to maximise impact reduction. However, despite individual-level information is often already collected during trapping operations it is seldom included when analysing predator impacts, potentially biasing the conservation outcomes expected under blanket removal. C_LIO_LIWe use a novel framework and two decades of invasive predator control data to estimate how individual variation in residency status influences the distance-dependent impacts of invasive American mink Neogale vison on water vole Arvicola amphibius occupancy across two prey surveys. We also develop a sub-model to predict mink residency status for individuals with missing age data. C_LIO_LIThe probability of capturing adult mink decreased with elevation and years of control, indicating that long-term control altered the resident population and demographic composition of mink around water vole sites. C_LIO_LIDistance-dependent negative impacts of mink varied by residency status, becoming negligible at approximately 20 km from water vole sites for resident mink and 2 km for transient. The spatial scale of mink impacts was largest during the first vole survey when resident mink were more abundant, and declined rapidly for the second survey, when mink were less abundant and spatially clustered. Our results suggest that water voles have benefited mostly from reducing resident mink rather than the total population, especially in early control phases. C_LIO_LIManagers can use our framework to develop spatially explicit and impact-based strategies, not restricted to invasive species control, to construct empirically informed management buffers around populations of conservation concern. Long-term efforts will change the landscape and invasive predator contexts, and thus we recommend iteratively updating and re-evaluating management outcome evaluations. We argue that incorporating individual heterogeneity improves our understanding of ecological mechanisms influencing management success but that the suitability of targeted strategies should be evaluated for target socioecological contexts. C_LI
Trigos-Peral, G.; Reyes Lopez, J. L.
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Urban green spaces are increasingly recognised as important refuges for biodiversity, yet their ecological value depends strongly on design and management. Here, we investigate how fine-scale structural and microhabitat components shape urban ant assemblages, using ants as indicators of broader arthropod responses to urbanisation. Ant communities were sampled in twelve urban green spaces in Cordoba (southern Spain) over a ten-year period (2004 to 2013) using pitfall traps, alongside detailed characterisation of vegetation structure and ground-layer microhabitats. In total, 38 species and 25,578 individuals were recorded. Microhabitat variables explained 58% of the variation in species occurrence. Community differences among microhabitats were driven primarily by nestedness, with dense herbaceous cover acting as a core habitat and edge-related components contributing disproportionately to beta diversity. Tree abundance showed a unimodal relationship with species richness, with maximum diversity at intermediate densities, while shrub and lawn cover had weak or inconsistent effects. Fine-scale elements such as leaf litter, stones, woody debris, and small bare-ground patches strongly influenced species occurrence by providing thermal refugia, nesting substrates, and foraging opportunities. The invasive Argentine ant (Linepithema humile) exhibited strong but spatially restricted dominance and species-specific negative effects on native ants, emphasising the role of habitat context in mediating invasion impacts. Our results demonstrate that urban biodiversity is maximised by enhancing fine-scale habitat heterogeneity rather than increasing green cover alone. We highlight practical design principles for urban green infrastructure that prioritise structural diversity and ground-layer complexity to support resilient arthropod communities.
Taelman, C.; Provoost, S.; Batsleer, F.; Bonte, D.; Van Uytvanck, J.
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1. Sandy beaches along urbanized coasts are increasingly managed through beach nourishment and hard infrastructure, yet these interventions often constrain natural dune-building processes. Along the Belgian coast, where much of the beach-dune interface is bordered by dikes, promenades and intensive recreation, strandline vegetation may provide an overlooked mechanism for retaining sand and initiating embryo dune development. 2. We assessed the potential for four pioneer dune plant species (Cakile maritima, Calamagrostis arenaria, Elymus farctus and Salsola kali) to establish, develop vegetation cover and contribute to sand accumulation along the Belgian coast. Using field surveys from 2017-2023, LiDAR-derived beach elevation and annual sediment dynamics, we modelled species occurrence and abundance/cover in low-disturbance reference zones and projected these relationships across the wider coastline. 3. Occurrence models identified where abiotic conditions allow plants to establish and persist until the late growing season, whereas zero-inflated abundance/cover models estimated expected vegetation development across environmental gradients. Predicted occurrence was widespread for several species, suggesting that the abiotic gradients modelled here are not the primary constraints on potential establishment across large parts of the coast. In contrast, expected abundance/cover showed stronger species-specific responses, particularly to sand accretion, indicating that sediment dynamics mainly affect post-establishment vegetation development rather than occurrence alone. 4. Independent field measurements of embryo dunes showed positive relationships between vegetation cover and local sand accumulation for all four species. When scaled using spatial predictions of potential abundance/cover, pioneer vegetation could retain substantial volumes of sand, with Cakile maritima contributing the largest share, followed by Salsola kali, Elymus farctus and Calamagrostis arenaria. Estimated volumes depended on assumptions about whether vegetation occurs as dispersed units or aggregated patches. 5. Synthesis and applications. Our results show that, even along a heavily urbanized and nourished coastline, abiotic conditions can support strandline vegetation and embryo dune initiation where disturbance is reduced. Management actions such as limiting trampling, adapting beach cleaning and protecting strandline vegetation could enhance the retention of nourished sand and support nature-based coastal defense. Rather than replacing engineered interventions, strandline vegetation may increase the efficiency with which available sediment is retained within the beach-dune system.
Lapegue, S.; Cornette, F.; Heurtebise, S.; Pouvreau, S.; Carpentier, C.; Colston-Nepali, L.; Bierne, N.; Reisser, C.
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The European flat oyster (Ostrea edulis), like numerous other oyster species, has been exploited for millennia and cultivated and translocated for centuries. Following a severe population decline, and in the context of ongoing conservation and restoration programs, genetic considerations must now be addressed to avoid mistakes. The objective of our study was to complement population genetic studies conducted at various scales along European coasts. Our sampling primarily targeted the French Atlantic, English Channel, and Mediterranean coasts, aiming to provide a fine-scale genetic characterization of populations in these regions. By integrating SNP array and low-coverage sequencing datasets, we obtained a comprehensive overview of the population genetic structure of Ostrea edulis across western Europe. Most previously identified clusters in Western Europe were confirmed. In France, populations assigned to these clusters exhibited notable within-patch homogeneity. However, two key findings emerged: (1) an extensive overlap zone between the Atlantic and western Mediterranean clusters, spanning at least from southern Portugal to southern France, and (2) the detection of a novel, clearly distinct cryptic cluster east of the English Channel, whose geographic range remains to be better delineated. These insights are critical for informing management decisions, particularly as restoration and conservation plans are currently being implemented across the species range.
Alves, T. C.; de Gasper, A. L.
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Premise: Rapid and accurate plant species identification is a critical challenge exacerbated by the taxonomic impediment. Although portable near-infrared (Micro NIR) spectroscopy represents a promising solution, the current absence of standardized protocols and a fundamental understanding of how critical acquisition and analysis parameters influence accuracy remain significant barriers. This study focused on the systematic optimization and validation of a comprehensive workflow designed to maximize the reliability of plant identification using this technology. To ensure methodological robustness across diverse foliar matrices, four vascular plant species were strategically selected as a representative test set to encompass morphological extremes, including significant variations in leaf thickness, pubescence, and surface texture. Methods: Using a portable spectrometer on herbarium specimens (exsiccate) of four vascular plant species, we systematically tested five spectral backgrounds, seven pre-processing methods, and four classification models. Subsequently, we optimized the number of spectral readings and evaluated the influence of the leaf scanning surface (adaxial vs. abaxial) on model accuracy. Results: The highest-performing combination was a Shiny Aluminum background, Second Derivative pre-processing, and a Random Forest model, which achieved a mean cross-validated accuracy of 99%. An average of just three spectral readings from the adaxial (upper) leaf face was sufficient to saturate model performance, proving statistically superior to other approaches (p < 0.001). Discussion: This study establishes a validated, high-accuracy protocol for plant species identification from herbarium specimens using portable NIR, offering a powerful tool for biodiversity studies. Direct applicability to fresh plants in the field requires future validation to account for the spectral influence of moisture variability.
RODRIGUEZ-GARCIA, E.; FERNANDEZ DEL CAMPO, J.; DOBSON, J. Y.; FONFRIA, E. S.; BORDEHORE, C.; PENA-MARTIN, C.
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The non-indigenous brown macroalga Rugulopteryx okamurae has emerged as one of the most aggressive marine invaders in European waters, deeply altering benthic communities and causing severe socioeconomic impacts. While its expansion has been extensively documented along the southern Iberian Peninsula, understanding the dynamics of its northward range expansion along the Spanish Mediterranean coast remains critical for coastal management. This study documents the first formal record of R. okamurae in Calpe (Alicante), representing its current northernmost distribution limit within the Comunitat Valenciana. Sampling was conducted through an initial opportunistic scuba diving observation along the surrounding waters of the Penyal dIfac Natural Park, followed by targeted underwater surveys and an ad hoc inspection of commercial bottom-trawling nets drying at the port of Calpe during June 2026. Morphological and anatomical identification was confirmed through cross-sections of the thallus under optical microscopy, revealing the presence of both the thick and intermediate morphotypes of the species. The collected specimens were found either entangled within a native photophilic algal canopy in shallow waters or recovered from deeper offshore fishing grounds. Given the absence of records in the area during 2023-2025 surveys, these findings suggest either a very recent front-wave colonization event or a contribution from nearby, yet undetected, established patches, driven by secondary local dispersal mechanisms such as drifting fragments and explicitly highlighting commercial fishing activities as an active vector. Furthermore, considering that the species was recorded within a marine protected area and deeper environments, these results highlight a potential ecological threat to local benthic ecosystems, emphasizing the urgent need f or competent authorities to implement spatiotemporal monitoring and public awareness campaigns to prevent the definitive establishment of this invader.
Akwetey, M. F. A.; Lamptey, E.; Abrokwah, S.; Aheto, D. W.; Mensah, P. K.; Okyere, I.; Akintola, S. L.; Pauly, D.
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Sakumo Lagoon, a small (1 km2) semi-open coastal lagoon in Ghana, lies between the cities of Accra and Tema. The lagoon and its surrounding wetland were designated a Ramsar Site in 1992, mainly because it served as a refuge for 66 local and migratory bird species. Its ecology, and the biology of its major fish species, notably the blackchin tilapia (Sarotherodon melanotheron) were thoroughly studied in 1971, when the lagoon was a diverse, mainly brackish ecosystem supporting a traditionally and well-managed fishery. In 2016-2017, another study found the lagoon mostly covered by floating vegetation and plastic waste. Finally, in 2024, a visual survey established that the floating vegetation had been almost completely replaced by terrestrial plants, with only a few square meters of garbage-strewn water in front of a culvert connecting the lagoon to the open sea. Several lagoons along the coast of Ghana have been similarly lost to urban sprawl and its various forms of pollution, but Sakumo Lagoon is a Ramsar Site, and its imminent disappearance should not remain undocumented.